I can only comment on the above, but this sounds like a dependency issue. I know about as much about Gentoo as I know about proctology, which isn't much.
That said, I have seen this with dependency problems in custom Ubuntu builds. You should try to nail down the behavior to what application is being used. From my research, Boxee uses two different apps. bxflplayer is one, and that seems to be to play WB, Hulu, CBS and a few others. But the other player seems to play CNN, Apple Trailers, and You Tube. (I think I'm right here, please correct me if I am wrong.)
If the behavior is similiar, the spinning will happen on WB, Hulu and CBS. In that case add the Gentoo equivalent of libnss3-1d libnss3-0d libnspr4-0d (from Ubuntu's repositories.)
Also, take a look at this thread:
http://forums.boxee.tv/showthread.php?t=4723
I have the same problems.
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